Getting FHIR import job properties - AWS HealthLake

Getting FHIR import job properties

Use DescribeFHIRImportJob to get FHIR import job properties. The following menus provide a procedure for the AWS Management Console and code examples for the AWS CLI and AWS SDKs. For more information, see DescribeFHIRImportJob in the AWS HealthLake API Reference.

To get FHIR import job properties

Choose a menu based on your access preference to AWS HealthLake.

CLI
AWS CLI

To describe a FHIR import job

The following describe-fhir-import-job example shows how to learn the properties of a FHIR import job using Amazon HealthLake.

aws healthlake describe-fhir-import-job \
    --datastore-id (Datastore ID) \
    --job-id c145fbb27b192af392f8ce6e7838e34f \
    --region us-east-1

Output:

{
    "ImportJobProperties": {
    "InputDataConfig": {
        "S3Uri": "s3://(Bucket Name)/(Prefix Name)/"
        { "arrayitem2": 2 }
    },
    "DataAccessRoleArn": "arn:aws:iam::(AWS Account ID):role/(Role Name)",
    "JobStatus": "COMPLETED",
    "JobId": "c145fbb27b192af392f8ce6e7838e34f",
    "SubmitTime": 1606272542.161,
    "EndTime": 1606272609.497,
    "DatastoreId": "(Datastore ID)"
    }
}

For more information, see Importing files to a FHIR Data Store in the Amazon HealthLake Developer Guide.

Python
SDK for Python (Boto3)
    @classmethod
    def from_client(cls) -> "HealthLakeWrapper":
        """
        Creates a HealthLakeWrapper instance with a default AWS HealthLake client.

        :return: An instance of HealthLakeWrapper initialized with the default HealthLake client.
        """
        health_lake_client = boto3.client("healthlake")
        return cls(health_lake_client)


    def describe_fhir_import_job(
        self, datastore_id: str, job_id: str
    ) -> dict[str, any]:
        """
        Describes a HealthLake import job.
        :param datastore_id: The data store ID.
        :param job_id: The import job ID.
        :return: The import job description.
        """
        try:
            response = self.health_lake_client.describe_fhir_import_job(
                DatastoreId=datastore_id, JobId=job_id
            )
            return response["ImportJobProperties"]
        except ClientError as err:
            logger.exception(
                "Couldn't describe import job with ID %s. Here's why %s",
                job_id,
                err.response["Error"]["Message"],
            )
            raise
Note

There's more on GitHub. Find the complete example and learn how to set up and run in the AWS Code Examples Repository.

Example availability

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Note

FHIR import job information is not available on the HealthLake Console. Instead, use the AWS CLI with DescribeFHIRImportJob to request import job properties such as JobStatus. For more information, refer to the AWS CLI example on this page.