HealthOmics API Reference

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HealthOmics API Reference - HealthOmics API Reference

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This document provides detailed information about the AWS HealthOmics API actions and their parameters.

For information about the IAM access control permissions you need to use this API, see Using IAM identity policies to manage permissions.

You can use AWS SDKs to access HealthOmics APIs using your favorite programming language. The SDKs automatically perform useful tasks for you, such as:

Cryptographically sign your service requests
Retry requests
Handle error responses

The Amazon Web Services General Reference lists the HealthOmics service endpoints for each region. See Service quotas and endpoints for HealthOmics. For each region, HealthOmics provides separate API endpoints for storage API operations, analytics API operations, and workflow API operations. The endpoints take the following format:



    storage-omics.region.amazonaws.com
    analytics-omics.region.amazonaws.com
    workflows-omics.region.amazonaws.com
 
 Examples:   
    storage-omics.us-east-1.amazonaws.com
    analytics-omics.eu-west-1.amazonaws.com
    workflows-omics.ap-southeast-1.amazonaws.com

The following resources provide additional information about the HealthOmics API.

Amazon Web Services General Reference
- Service quotas and endpoints for HealthOmics.
AWS Command Line Interface
- HealthOmics CLI commands.
Quotas for HealthOmics API operations
- See API quotas in the HealthOmics User Guide.

To identify the API operations that apply to storage, analytics, and workflows, see the following tables.

Storage API operation
CreateSequenceStore, CreateReferenceStore, DeleteSequenceStore, DeleteReferenceStore
BatchDeleteReadSet, DeleteReference
CreateMultipartReadSetUpload, CompleteMultipartReadSetUpload, AbortMultipartReadSetUpload
GetReference
UploadReadSetPart
GetReadSet
GetSequenceStore, ListSequenceStores
GetReadSetMetadata, ListReadSets
StartReadSetImportJob, GetReadSetImportJob, ListReadSetImportJobs
StartReadSetExportJob, GetReadSetExportJob, ListReadSetExportJobs
ListReferenceStores
StartReferencetImportJob, GetReferenceImportJob, ListReferenceImportJobs
ListReferences, GetReferenceMetadata
StartReadsetActivationJob
ListReadsetActivationJobs, GetReadSetActivationJob
ListMultipartReadSetUploads, ListReadSetUploadParts
TagResource, UntagResource, ListTagsForResource

Workflow API operation
StartRun
CreateWorkflow
CancelRun, DeleteRun, GetRun, GetRunTask, ListRunTasks, ListRuns
CreateRunGroup, DeleteRunGroup, GetRunGroup, ListRunGroups, UpdateRunGroup
CreateRunCache, UpdateRunCache, DeleteRunCache, GetRunCache, ListRunCaches
DeleteWorkflow, GetWorkflow, ListWorkflows, UpdateWorkflow

Analytics API operation
CreateVariantStore, DeleteVariantStore, GetVariantStore, ListVariantStores, UpdateVariantStore
StartVariantImportJob, CancelVariantImportJob, GetVariantImportJob, ListVariantImportJobs
CreateAnnotationStore, DeleteAnnotationStore, GetAnnotationStore, ListAnnotationStores, UpdateAnnotationStore
StartAnnotationImportJob, ListAnnotationImportJobs, GetAnnotationImportJob, CancelAnnotationImportJob